Timeline


and

Feb 25, 2009:

4:16 PM Changeset [973] by jari
Addresses #118. Required yat version is 0.5 or later
3:59 PM Changeset [972] by jari
Addresses #118. Load of java wrapper works but manual install of …
1:45 PM Ticket #178 (The MeV launcher should use attached file instead of running ...) created by nicklas
This is primarily a performance requirement. It can take a lot of time …
1:21 PM Changeset [971] by martin
Added library-files to the ignore-list
9:43 AM Changeset [970] by martin
Preparing for future release Illumina package v1.4
9:40 AM Milestone Illumina package v1.3 completed
See Illumina plug-ins package for BASE
9:39 AM Ticket #173 (Remove the float to integer conversions in beadstudio2ibs.pl when ...) closed by martin
fixed: Wiki page is now updated.
9:36 AM net.sf.basedb.illumina edited by martin
Releasing Illumina package 1.3 (diff)
9:14 AM illumina-plugins-1.3.tar.gz attached to net.sf.basedb.illumina by martin
Releasing Illumina package 1.3
9:12 AM Changeset [969] by martin
Tagging release 1.3
9:07 AM Changeset [968] by martin
Preparing release 1.3

Feb 23, 2009:

3:16 PM Changeset [967] by martin
References #119 The plug-in is mostly ready for testing

Feb 18, 2009:

3:13 PM Changeset [966] by martin
References #119 Part of the normalization algorithm is implemented
8:55 AM Changeset [965] by jari
Corrected flags summary output

Feb 17, 2009:

8:56 AM se.lu.onk.IlluminaSNPNormalization edited by markus
(diff)

Feb 16, 2009:

10:21 PM Changeset [964] by jari
Added support to add qQN source to the normalizer package.
9:33 PM Changeset [963] by jari
Improved configure.ac and added option to disable check on required libs.
9:19 PM Changeset [962] by jari
Added missing include statement.

Feb 13, 2009:

12:30 AM Changeset [961] by jari
Refs #118 and #161. PluginUtilities? download support. Added distclean …

Feb 12, 2009:

3:44 PM net.sf.basedb.normalizers edited by peter
corrected query syntax -- see wiki:TracQuery#UsingTracLinks details (diff)
2:59 PM net.sf.basedb.normalizers edited by jari
Fixed order in ticket query (diff)
2:46 PM Changeset [960] by jari
Refs #118. Changes suggested by the yat developer team.

Feb 11, 2009:

8:51 AM Changeset [959] by martin
Fixes #164 Improve documentation on how to upgrade the illumina …
8:51 AM Ticket #164 (Improve documentation on how to upgrade the illumina plug-in package) closed by martin
fixed: (In [959]) Fixes #164 Improve documentation on how to upgrade the …

Feb 10, 2009:

10:53 AM Changeset [958] by martin
Fixes #177 Add information about how to upgrade the normalization package.
10:53 AM Ticket #177 (Add information about how to upgrade the normalization package.) closed by martin
fixed: (In [958]) Fixes #177 Add information about how to upgrade the …

Feb 9, 2009:

8:29 AM Changeset [957] by nicklas
Fixes #175: Update the ant script to include contrib directory when …
8:29 AM Ticket #175 (Update the ant script to include contrib directory when creating package.) closed by nicklas
fixed: (In [957]) Fixes #175: Update the ant script to include contrib …

Feb 8, 2009:

10:36 PM Changeset [956] by jari
Removed stray character in configure.ac
10:18 PM Changeset [955] by jari
Refs #118. Changes suggested by the yat developer team.
10:06 PM Changeset [954] by jari
Refs #118. Changes suggested by the yat developer team.
10:02 PM Changeset [953] by jari
Refs #118. Changes suggested by the yat developer team.

Feb 6, 2009:

11:58 AM se.lu.onk.BAFsegmentation edited by markus
(diff)
11:55 AM se.lu.onk.BAFsegmentation edited by markus
(diff)
10:47 AM Changeset [952] by jari
Addresses #118. Added underlying C++ binary for the qQuantile.
10:10 AM Ticket #177 (Add information about how to upgrade the normalization package.) created by jari
Explicitly state how an upgrade of the package is performed. If it is …

Feb 5, 2009:

4:40 PM Changeset [951] by martin
References #119 Added plugin-class. The plugin doesn't really do …

Feb 4, 2009:

4:35 PM Changeset [950] by martin
References #119 Moved some method from the QuantileNormalization?

Jan 30, 2009:

9:25 AM Changeset [949] by martin
Fixes #176 Create release document
9:25 AM Ticket #176 (Create release document) closed by martin
fixed: (In [949]) Fixes #176 Create release document
9:00 AM Ticket #168 (MD5 sum should be automatically generated for a package) closed by martin
fixed: (In [948]) Fixes #168 MD5 sum should be automatically generated for a …
9:00 AM Changeset [948] by martin
Fixes #168 MD5 sum should be automatically generated for a package

Jan 29, 2009:

4:32 PM Ticket #166 ((net.sf.basedb.normalizers) Automatic progression of version to source ...) closed by martin
fixed: (In [947]) Fixes #166 (net.sf.basedb.normalizers) Automatic …
4:32 PM Changeset [947] by martin
Fixes #166 (net.sf.basedb.normalizers) Automatic progression of …
4:25 PM Ticket #176 (Create release document) created by martin
A document to describe the release procedure step-by-step. For …

Jan 28, 2009:

2:17 PM Changeset [946] by martin
References #161 Set external jar-files to be ignored
2:16 PM Changeset [945] by martin
Fixes #161 (net.sf.basedb.normalizers) Automatic download of BASE API
2:16 PM Ticket #161 ((net.sf.basedb.normalizers) Automatic download of BASE API) closed by martin
fixed: (In [945]) Fixes #161 (net.sf.basedb.normalizers) Automatic download …
1:24 PM net.sf.basedb.illumina edited by martin
References #174 (diff)
1:19 PM Changeset [944] by martin
References #173 The 'float to integer' conversion has been removed but …
11:53 AM net.sf.basedb.illumina edited by martin
Locked beadstudio2ibs.pl link to revision 940 due to some changes in … (diff)
11:41 AM WikiStart edited by martin
Updated link to base2 core plug-ins (diff)
11:10 AM Changeset [943] by martin
Fixes #171 IBS raw data importer should be able to handle floats in …
11:10 AM Ticket #171 (IBS raw data importer should be able to handle floats in some columns) closed by martin
fixed: (In [943]) Fixes #171 IBS raw data importer should be able to handle …

Jan 27, 2009:

4:21 PM Changeset [942] by martin
Fixes #170 Result dialouge after batch importing several raw bioassays …
4:21 PM Ticket #170 (Result dialouge after batch importing several raw bioassays is ...) closed by martin
fixed: (In [942]) Fixes #170 Result dialouge after batch importing several …
2:58 PM Changeset [941] by martin
References #174 license text should referr to the Illumina plug-in package
2:37 PM Ticket #174 (Change license to GPL 3 for the illumina package?) closed by martin
fixed: (In [940]) Fixes #174 Change license to GPL 3 for the illumina package
2:37 PM Changeset [940] by martin
Fixes #174 Change license to GPL 3 for the illumina package
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