Timeline
Feb 13, 2008:
- 9:54 AM Changeset [585] by
- References #89: Installation program and documentation Updated …
- 9:54 AM Ticket #89 (Installation program and documentation) updated by
- (In [585]) References #89: Installation program and documentation …
Feb 12, 2008:
- 11:17 AM net.sf.basedb.illumina edited by
- (diff)
- 9:46 AM Ticket #98 (Implement validator and metadata extractor plug-in for BGX files) closed by
- fixed: (In [584]) Fixes #98: Implement validator and metadata extractor …
- 9:46 AM Changeset [584] by
- Fixes #98: Implement validator and metadata extractor plug-in for BGX files
- 9:40 AM Ticket #89 (Installation program and documentation) updated by
- (In [583]) References #89: Installation program and documentation …
- 9:40 AM Changeset [583] by
- References #89: Installation program and documentation Minor …
Feb 11, 2008:
- 3:35 PM Changeset [582] by
- Removed unused imports
- 3:14 PM Changeset [581] by
- References #90: Create array design from a bgx-file Fixed missing …
- 3:14 PM Ticket #90 (Create array design from a bgx-file) updated by
- (In [581]) References #90: Create array design from a bgx-file Fixed …
- 2:50 PM Changeset [580] by
- References #89: Installation program and documentation Added 'Getting …
- 2:50 PM Ticket #89 (Installation program and documentation) updated by
- (In [580]) References #89: Installation program and documentation …
- 2:46 PM Ticket #98 (Implement validator and metadata extractor plug-in for BGX files) reopened by
- The metadata extractor only extracts the number of controls, not the …
Feb 8, 2008:
- 2:52 PM Ticket #98 (Implement validator and metadata extractor plug-in for BGX files) closed by
- fixed: (In [579]) Fixes #98 Implement validator and metadata extractor …
- 2:52 PM Changeset [579] by
- Fixes #98 Implement validator and metadata extractor plug-in for BGX files
- 2:21 PM Changeset [578] by
- Fixes #90 Create array design from a bgx-file.
- 2:21 PM Ticket #90 (Create array design from a bgx-file) closed by
- fixed: (In [578]) Fixes #90 Create array design from a bgx-file.
- 2:20 PM Ticket #90 (Create array design from a bgx-file) updated by
-
Description changed
- 1:42 PM Ticket #91 (Import Illumina Bead Summary(IBS) files as raw data) updated by
-
Description, Summary changed
Changed scandata -> Bead Summary - 1:33 PM Ticket #89 (Installation program and documentation) updated by
- (In [577]) References #89 Installation plug-in is now able to create …
- 1:33 PM Changeset [577] by
- References #89 Installation plug-in is now able to create Illumina …
Feb 7, 2008:
- 8:02 PM Ticket #89 (Installation program and documentation) updated by
- What about creating Scanner (Hardware) and Software entries? …
- 4:43 PM Changeset [576] by
- References #89 Changed to wiki format and configured some svn properties
- 4:43 PM Ticket #89 (Installation program and documentation) updated by
- (In [576]) References #89 Changed to wiki format and configured some …
- 2:19 PM Changeset [575] by
- Reference #94 Added more extended properties for Illumina reporters …
- 10:14 AM Ticket #99 (The tagging system of the repository should be changed) created by
- Jari has the details in his head, contact him on this issue.
- 9:54 AM Changeset [574] by
- Added information on how to resolve missing probe set situations.
Feb 6, 2008:
- 4:47 PM Changeset [573] by
- References #89 Added extended properties to be used with Illumina in BASE.
- 4:47 PM Ticket #89 (Installation program and documentation) updated by
- (In [573]) References #89 Added extended properties to be used with …
- 3:46 PM Changeset [572] by
- References #89 Change names, ids and variables according to …
- 3:46 PM Ticket #89 (Installation program and documentation) updated by
- (In [572]) References #89 Change names, ids and variables according to …
- 11:28 AM Ticket #89 (Installation program and documentation) updated by
- (In [571]) References #89 Updated svn-properties for README file
- 11:28 AM Changeset [571] by
- References #89 Updated svn-properties for README file
- 11:22 AM Changeset [570] by
- References #89 Inserted the readme-text in wiki format.
- 11:22 AM Ticket #89 (Installation program and documentation) updated by
- (In [570]) References #89 Inserted the readme-text in wiki format.
Feb 5, 2008:
- 8:40 PM net.sf.basedb.illumina edited by
- (diff)
- 5:13 PM se.lu.thep.affymetrix edited by
- APT plug-in location changed. (diff)
- 5:11 PM PluginDownload edited by
- APT plug-in location changed. (diff)
- 4:51 PM Changeset [569] by
- References #98 The validator and meta data reader is done. The …
- 4:51 PM Ticket #98 (Implement validator and metadata extractor plug-in for BGX files) updated by
- (In [569]) References #98 The validator and meta data reader is done. …
- 12:27 PM Changeset [568] by
- References #91: Import Illumina scandata files as raw data Call …
- 12:27 PM Ticket #91 (Import Illumina Bead Summary(IBS) files as raw data) updated by
- (In [568]) References #91: Import Illumina scandata files as raw data …
Feb 1, 2008:
- 4:45 PM Changeset [567] by
- References #98 A start of a BGX validator/metadatareader.
- 4:45 PM Ticket #98 (Implement validator and metadata extractor plug-in for BGX files) updated by
- (In [567]) References #98 A start of a BGX validator/metadatareader.
- 10:59 AM Changeset [566] by
- References #89: Installation program and documentation Added rest …
- 10:59 AM Ticket #89 (Installation program and documentation) updated by
- (In [566]) References #89: Installation program and documentation …
- 8:14 AM Ticket #98 (Implement validator and metadata extractor plug-in for BGX files) updated by
-
Status, Owner changed
Jan 31, 2008:
- 4:48 PM Ticket #90 (Create array design from a bgx-file) updated by
- (In [565]) References #90 Added a default plugin configuration to come …
- 4:48 PM Changeset [565] by
- References #90 Added a default plugin configuration to come along with …
- 3:01 PM Changeset [564] by
- References #91: Import Illumina scandata files as raw data Error …
- 3:01 PM Ticket #91 (Import Illumina Bead Summary(IBS) files as raw data) updated by
- (In [564]) References #91: Import Illumina scandata files as raw data …
- 9:14 AM Ticket #98 (Implement validator and metadata extractor plug-in for BGX files) created by
- It should simply check the [Heading] section in the beginning of the …
Jan 30, 2008:
- 2:51 PM Changeset [563] by
- References #90 Refine comments and removed some blank lines.
- 2:51 PM Ticket #90 (Create array design from a bgx-file) updated by
- (In [563]) References #90 Refine comments and removed some blank lines.
- 2:46 PM Ticket #91 (Import Illumina Bead Summary(IBS) files as raw data) updated by
- (In [562]) References #91: Import Illumina scandata files as raw data …
- 2:46 PM Changeset [562] by
- References #91: Import Illumina scandata files as raw data The …
- 2:29 PM Changeset [561] by
- References #90 The plug-in can now be used to import features to an …
- 2:29 PM Ticket #90 (Create array design from a bgx-file) updated by
- (In [561]) References #90 The plug-in can now be used to import …
Jan 29, 2008:
- 4:00 PM Ticket #90 (Create array design from a bgx-file) updated by
-
Status, Owner changed
- 2:53 PM Changeset [560] by
- References #91: Import Illumina scandata files as raw data A skeleton …
- 2:53 PM Ticket #91 (Import Illumina Bead Summary(IBS) files as raw data) updated by
- (In [560]) References #91: Import Illumina scandata files as raw data …
- 11:14 AM Ticket #91 (Import Illumina Bead Summary(IBS) files as raw data) updated by
-
Status, Owner changed
- 8:51 AM Ticket #94 (Import reporter annotations from bgx files) updated by
- (In [559]) References #94: Import reporter annotations from bgx files …
- 8:51 AM Changeset [559] by
- References #94: Import reporter annotations from bgx files The …
Jan 28, 2008:
- 4:31 PM Changeset [558] by
- have fixed several bugs after testing whole imports, notably a problem …
- 2:03 PM Changeset [557] by
- References #89: Installation program and documentation Documented the …
- 2:03 PM Ticket #89 (Installation program and documentation) updated by
- (In [557]) References #89: Installation program and documentation …
- 1:58 PM Changeset [556] by
- References #94: Import reporter annotations from bgx files First …
- 1:58 PM Ticket #94 (Import reporter annotations from bgx files) updated by
- (In [556]) References #94: Import reporter annotations from bgx files …
- 11:48 AM Ticket #89 (Installation program and documentation) updated by
- (In [555]) References #89 Added more property checks when an item …
- 11:48 AM Changeset [555] by
- References #89 Added more property checks when an item already exists …
- 7:41 AM Ticket #94 (Import reporter annotations from bgx files) updated by
-
Status, Owner changed
Jan 26, 2008:
- 12:22 AM Ticket #97 (Remove Plier support from se.lu.thep.affymetrix) created by
- The Plier algorithm is a part of the …
- 12:16 AM Ticket #73 (Plier fails to import data) closed by
- wontfix: The APT …
Jan 25, 2008:
- 11:35 PM Ticket #96 (Make the se.lu.thep.affymetrix plug-in compatible with the ...) created by
- 10:39 PM PluginDownload edited by
- Added APT plug-in. (diff)
- 10:39 PM se.lu.thep.affymetrix edited by
- Added note about the APT plug-in (superseeds Plier) (diff)
- 10:24 PM PluginDownload edited by
- Clarifying plugin compatibility statement. (diff)
- 4:38 PM Ticket #89 (Installation program and documentation) updated by
- (In [554]) References #89 Illumina items are now created by the …
- 4:38 PM Changeset [554] by
- References #89 Illumina items are now created by the installation …
- 2:47 PM Ticket #95 (Intensity calculator for Illumina expression data) created by
- The regular intensity calculator can be used but only for copying the …
- 2:42 PM Ticket #93 (Illumina SNP validator and meta-data extractor) updated by
-
Milestone changed
- 2:40 PM Ticket #93 (Illumina SNP validator and meta-data extractor) updated by
-
Milestone changed
- 2:39 PM Ticket #94 (Import reporter annotations from bgx files) created by
- See also #90. We probably need a different plug-in for the reporter …
- 2:34 PM Ticket #92 (Create Illumina SNP raw data type) closed by
- duplicate: Part of ticket #89
- 2:25 PM Changeset [553] by
- References #89: Installation program and documentation Added INSTALL file
- 2:25 PM Ticket #89 (Installation program and documentation) updated by
- (In [553]) References #89: Installation program and documentation …
Jan 24, 2008:
- 5:41 PM Changeset [552] by
- have added input validation (mandatory fields check) added back …
- 4:52 PM Changeset [551] by
- References #89 Start to insert illumina items with the installation plug-in
- 4:52 PM Ticket #89 (Installation program and documentation) updated by
- (In [551]) References #89 Start to insert illumina items with the …
Jan 23, 2008:
- 3:21 PM Changeset [550] by
- have restructured the code completely that writes the hybs section
Jan 22, 2008:
- 2:41 PM Changeset [549] by
- References #89: Installation program and documentation Updated …
- 2:41 PM Ticket #89 (Installation program and documentation) updated by
- (In [549]) References #89: Installation program and documentation …
- 1:04 PM Ticket #91 (Import Illumina Bead Summary(IBS) files as raw data) updated by
-
Milestone changed
- 1:03 PM Ticket #93 (Illumina SNP validator and meta-data extractor) updated by
-
Milestone changed
- 1:00 PM Ticket #89 (Installation program and documentation) updated by
-
Milestone changed
- 12:59 PM Ticket #90 (Create array design from a bgx-file) updated by
-
Milestone changed
- 12:59 PM Ticket #92 (Create Illumina SNP raw data type) updated by
-
Milestone changed
- 11:01 AM Ticket #93 (Illumina SNP validator and meta-data extractor) created by
- The data files should be validated automatically and some data such as …
- 10:55 AM Ticket #92 (Create Illumina SNP raw data type) created by
- Needed for SNP data from the Illumina platform. The raw files are to …
- 10:44 AM Ticket #91 (Import Illumina Bead Summary(IBS) files as raw data) created by
- The rawest form of raw data generated by the Illumina scanner are the …
- 10:42 AM Changeset [548] by
- new page added to gather additional info needed for autogeneration of …
- 10:36 AM Ticket #90 (Create array design from a bgx-file) created by
- A bgx file contains array design information for Illumina arrays. The …
- 10:27 AM Ticket #89 (Installation program and documentation) created by
- Create an installation program with documentation. The installation …
- 8:40 AM net.sf.basedb.illumina created by
- Created front page for the Illumina plug-ins package
Jan 21, 2008:
- 11:25 AM Changeset [547] by
- number of issues fixed in UI
Jan 18, 2008:
- 3:12 PM Changeset [546] by
- Initial project structure is now in place.
- 11:27 AM Changeset [545] by
- fixed bug in the submission of experiments that provide their own …
- 10:11 AM Changeset [544] by
- submission with existing tab2mage file implemented
Jan 17, 2008:
- 12:51 PM Changeset [543] by
- submit mechanism has been changed to interactive -- submit.jsp now …
- 12:20 PM Changeset [542] by
- Adding root folder for example code (plug-ins and webservices client)
- 12:19 PM Changeset [541] by
- Adding root folder for the Illumina plug-ins project
Jan 16, 2008:
- 1:12 PM Changeset [540] by
- changed code so that users can either run the wizard or import data …
- 11:21 AM Changeset [539] by
- forgot to add new files -- now added
- 9:12 AM Changeset [538] by
- 9:11 AM Changeset [537] by
- 9:11 AM Changeset [536] by
- 9:11 AM Changeset [535] by
- 9:10 AM Changeset [534] by
- 9:10 AM Changeset [533] by
Jan 15, 2008:
- 5:35 PM Changeset [532] by
- -major expansion of system to allow for different use cases - now …
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