Timeline


and

Jun 27, 2007:

10:32 PM Ticket #70 (Add releasing procedure to se.lu.thep.affymetrix) created by jari
relates to #71
10:27 PM PluginDownload edited by jari
Release 0.7 of se.lu.thep.affymetrix (diff)
10:25 PM se.lu.thep.affymetrix edited by jari
Released 0.7 (diff)
10:23 PM base_affymetrix_plugin-0.7-src.tar.gz.MD5 attached to se.lu.thep.affymetrix by jari
10:23 PM base_affymetrix_plugin-0.7-src.tar.gz attached to se.lu.thep.affymetrix by jari
10:22 PM base_affymetrix_plugin-0.7.tar.gz.MD5 attached to se.lu.thep.affymetrix by jari
10:22 PM base_affymetrix_plugin-0.7.tar.gz attached to se.lu.thep.affymetrix by jari
10:21 PM Changeset [350] by jari
Tagging version 0.7 of se.lu.thep.affymetrix.
10:20 PM Changeset [349] by jari
Renaming 0.6 tag of se.lu.thep.affymetrix.
10:13 PM Changeset [348] by jari
Preparing 0.7 release of se.lu.thep.affymetrix, update copyrights.
10:01 PM Changeset [347] by jari
Preparing 0.7 release of se.lu.thep.affymetrix
9:59 PM Changeset [346] by jari
Preparing 0.7 release of se.lu.thep.affymetrix
9:47 PM Tickets #67,​68 batch updated by jari
fixed: (In [345]) Fixes #67 and #68. Added information on how to install in …
9:47 PM Changeset [345] by jari
Fixes #67 and #68. Added information on how to install in Microsoft …

Jun 25, 2007:

11:17 AM Changeset [344] by jari
Adding entries to ChangeLog?.
9:52 AM Ticket #69 (DBControl bad code style, beware and fix it!) closed by jari
fixed: (In [343]) Fixes #69. DBControl usage is improved.
9:52 AM Changeset [343] by jari
Fixes #69. DBControl usage is improved.
9:43 AM Ticket #66 (The plier and rmaexpress plug-ins should make an graceous exit when ...) closed by jari
worksforme: On the trunk heading towards BASE 2.4 and the latest version of the …
9:40 AM Ticket #69 (DBControl bad code style, beware and fix it!) created by jari
Read the below comments and go through the code and fix the issues! …

Jun 23, 2007:

11:58 PM Changeset [342] by jari
Fixed spelling errors.

Jun 22, 2007:

9:31 PM se.lu.thep.affymetrix edited by jari
Added todo list (diff)
9:28 PM Ticket #68 (Update the documentation to explain what should be done to get the ...) created by jari
9:27 PM Ticket #67 (The plier and rmaexpress plug-ins does not work in a Microsoft enviornment) created by jari
There are people running BASE in a Microsoft environment! The current …
9:24 PM Ticket #66 (The plier and rmaexpress plug-ins should make an graceous exit when ...) created by jari
In 0.6 the plugin will exit with a stack trace like this: […]
6:08 PM se.lu.thep.affymetrix edited by jari
Updated INSTALL and README links. (diff)

Jun 18, 2007:

11:15 AM WikiStart edited by peter
(diff)

Jun 15, 2007:

9:45 AM WikiStart edited by jari
Added login information for ticket submitters. (diff)

Jun 14, 2007:

10:30 AM Changeset [341] by peter
update copyright

Jun 13, 2007:

6:39 PM Changeset [340] by peter
fixes #65 version number in plugin_WeNNI.base is generated …
6:39 PM Ticket #65 (version number in BASE1 plugin is not updated automatically) closed by peter
fixed: (In [340]) fixes #65 version number in plugin_WeNNI.base is generated …
5:14 PM Ticket #65 (version number in BASE1 plugin is not updated automatically) created by peter
4:28 PM Changeset [339] by jari
Added comment (recommendation) on using presence filter in BASE 1.
11:27 AM Changeset [338] by peter
using ac macro fully rather than bashing

Jun 12, 2007:

7:01 PM DeveloperPage edited by peter
(diff)
6:58 PM Ticket #61 (change structure of tags) closed by peter
fixed
6:56 PM se.lu.thep.affymetrix edited by peter
(diff)
6:55 PM SubversionCheckout edited by peter
(diff)
6:53 PM Changeset [337] by peter
reorganizing tag file structure refs #61
6:11 PM Changeset [336] by peter
adding javacflags in configure
3:11 PM Changeset [335] by peter
slimming down files refs #50
11:18 AM Changeset [334] by peter
first compilable version refs #50
9:32 AM Changeset [333] by peter
improved Makefile.am refs #50

Jun 11, 2007:

4:49 PM Changeset [332] by peter
class is BASE2 specific and should be in that directory
4:47 PM Changeset [331] by peter
initial commit for abstract plugin support class for running external …
4:38 PM Changeset [330] by peter
clean removes entire .build file structure

Jun 8, 2007:

3:00 PM Changeset [329] by peter
overriding autotools variable bindir, so bins are installed in …

Jun 7, 2007:

6:25 PM Ticket #59 (--with-gsl configure option) closed by peter
fixed: (In [328]) cleaning up and adding --with-gsl option fixes #59
6:25 PM Changeset [328] by peter
cleaning up and adding --with-gsl option fixes #59
5:03 PM Changeset [327] by peter
refs #58 variable INSTALLDIR is set in configure and propagated out to …

Jun 5, 2007:

9:07 AM Ticket #62 (make check does not work) closed by peter
fixed
9:01 AM WikiStart edited by peter
(diff)

Jun 1, 2007:

4:55 PM Changeset [326] by peter
fixes #325 make check works
4:37 PM Changeset [325] by peter
refs #62 make check now works in base1 mode

May 31, 2007:

7:21 PM Ticket #64 (configure does not find basefile.h) created by peter
Even though configure does not find basefile.h the pre-processor …
7:16 PM Ticket #57 (--with-base configure option [default /usr/local/base]) closed by peter
fixed: (In [324]) fixes #57. --enable-base=X where X is either base1 base2 or …
7:16 PM Changeset [324] by peter
fixes #57. --enable-base=X where X is either base1 base2 or stand-alone.
1:10 PM Ticket #63 (make distcheck should work) created by peter
1:10 PM Ticket #62 (make check does not work) created by peter
12:51 PM Changeset [323] by peter
minor fixes
11:52 AM Changeset [322] by peter
fixed typo
11:23 AM Changeset [321] by peter
improved flags to local c++_tools

May 30, 2007:

12:15 AM Ticket #61 (change structure of tags) created by peter
How? Add the package name to the path. What do you mean? Well, for …
12:07 AM DeveloperPage edited by peter
(diff)

May 29, 2007:

11:30 PM WikiStart edited by peter
(diff)
4:57 PM Ticket #51 (add configure options to WeNNI) closed by peter
fixed: (In [320]) fixes #51. configure option state {base1, base2, …
4:57 PM Changeset [320] by peter
fixes #51. configure option state {base1, base2, stand-alone} where …
4:37 PM Ticket #60 (explain how to run wenni (base1 version) against a base_devkit) created by peter
3:54 PM Ticket #59 (--with-gsl configure option) created by peter
3:53 PM Ticket #58 (--base-plugindir configure option) created by peter
In BASE2 default is <--with-base>/www/plugins Files are installed in …
3:52 PM Ticket #57 (--with-base configure option [default /usr/local/base]) created by peter
12:09 PM Ticket #49 (Rename wiki:onk.lu.se.ZTest to wiki:se.lu.onk.ZTest) closed by jari
fixed
12:09 PM DeveloperPage edited by jari
(diff)
12:07 PM DeveloperPage edited by jari
Renaming onk.lu.se.ZTest (diff)
12:05 PM PluginDownload edited by jari
Renaming onk.lu.se.ZTest (diff)
12:04 PM poolSD.png attached to se.lu.onk.ZTest by jari
12:04 PM zscore.png attached to se.lu.onk.ZTest by jari
12:03 PM probability.png attached to se.lu.onk.ZTest by jari
12:03 PM normsdist.2.png attached to se.lu.onk.ZTest by jari
12:03 PM normsdist.png attached to se.lu.onk.ZTest by jari
11:59 AM se.lu.onk.ZTest created by jari
Renaming onk.lu.se.ZTest
1:17 AM Changeset [319] by peter
empty WeNNI.java and some minor changes in configure.ac stolen from yat

May 28, 2007:

11:37 PM Ticket #56 (rename component onk.lu.se to be se.lu.onk -- split into several packages) created by peter
I can see no reason why this component should be an outlier. The …
11:33 PM Ticket #55 (update ChangeLog) created by peter
and make it look good in wiki
11:32 PM Ticket #54 (update README) created by peter
and make it look good in wiki
11:32 PM Ticket #53 (update INSTALL) created by peter
and make it look good in wiki
11:30 PM Changeset [318] by peter
adding Makefile.am for base2 dir
11:27 PM Changeset [317] by peter
wikized README et al and corrected configure.ac
11:18 PM Changeset [316] by peter
replaced todo items with a reference to todo list in wiki
11:14 PM Ticket #52 (Add educational material and use cases.) created by peter
11:10 PM Changeset [315] by peter
changed structure again. NNIFileConverter is moved to bin, which means …
10:46 PM Changeset [314] by peter
updating copyrights in modified files and added some Makefile.am
10:35 PM Changeset [313] by peter
new file structure for BASE2
9:55 PM Ticket #48 (Rename wiki:WeNNI to wiki:se.lu.thep.wenni) closed by peter
invalid: Published homepage is http://lev.thep.lu.se/trac/baseplugins/wiki/WeNNI
8:02 PM Ticket #51 (add configure options to WeNNI) created by peter
Thre cases should be supported * ./configure --stand-alone -- skip …
7:55 PM Ticket #50 (create a BASE2 plug-in for se.lu.thep.WeNNI) created by peter
6:23 PM Changeset [312] by peter
removed imports not needed and added dependency in Makefile. Inherited …
5:42 PM Changeset [311] by peter
creating a base class for plier and rma
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