Opened 5 years ago

Closed 5 years ago

#663 closed enhancement (fixed)

Demux script should not gzip FASTQ files until the last step

Reported by: Nicklas Nordborg Owned by: Nicklas Nordborg
Priority: major Milestone: Reggie v2.16.2
Component: net.sf.basedb.reggie Keywords:
Cc:

Description

This currently happens when merging the FASTQ files from the demux. Tests have shown that Trimmomatic is a lot faster when working with non-zipped data.

Change History (1)

comment:1 Changed 5 years ago by Nicklas Nordborg

Resolution: fixed
Status: newclosed

(In [2811]) Fixes #663: Demux script should not gzip FASTQ files until the last step

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