Opened 7 years ago

Closed 6 years ago

#560 closed enhancement (fixed)

Use annotations on Histology work list to indicate progress

Reported by: Nicklas Nordborg Owned by: Nicklas Nordborg
Priority: minor Milestone: Reggie v2.16
Component: net.sf.basedb.reggie Keywords:
Cc:

Description (last modified by Nicklas Nordborg)

This is related to #557 which solved the problem with deleting registered Histology work lists by changing the external id. It would be better to use annotations to keep track of this. For example, when the paraffin blocks are registered the work list is annotated with the EmbeddingDate annotation. Then we can use this annotation for filtering instead of the external id.

Requires BASE 3.3 (http://base.thep.lu.se/ticket/1795)

Change History (4)

comment:1 Changed 7 years ago by Nicklas Nordborg

Description: modified (diff)

comment:2 Changed 7 years ago by Nicklas Nordborg

Milestone: Reggie v2.xReggie v2.16

comment:3 Changed 6 years ago by Nicklas Nordborg

Status: newassigned

comment:4 Changed 6 years ago by Nicklas Nordborg

Resolution: fixed
Status: assignedclosed

(In [2371]) Fixes #560: Use annotations on Histology work list to indicate progress

A manual update to existing work lists are required:

  • Find all work lists with external id=net.sf.basedb.reggie.histology.work-list-complete
  • Set the EmbedDate annotation to the date the blocks in the work list were embedded = the creation date for the paraffin block
  • Change the external id to net.sf.basedb.reggie.histology.work-list
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