Changes between Version 5 and Version 6 of Ticket #533


Ignore:
Timestamp:
Dec 10, 2013, 12:45:15 PM (10 years ago)
Author:
Nicklas Nordborg
Comment:

Legend:

Unmodified
Added
Removed
Modified

  • Ticket #533 – Description

    v5 v6  
    1111 3. (#547) Start demux and merge. This wizard starts the demux and merge operations.
    1212
    13  4. Register demux and merge as ended. At the end we have one "!MergedSequences" item for each "Library" from the flow cells that was sequenced. A count of the number of reads for each library must be recorded and is used to determine if the library needs to be re-sequenced or not. FASTQ files for each library are stored on the server.
     13 4. (#548) Register demux and merge as ended. At the end we have one "!MergedSequences" item for each "Library" from the flow cells that was sequenced. A count of the number of reads for each library must be recorded and is used to determine if the library needs to be re-sequenced or not. FASTQ files for each library are stored on the server.
    1414
    1515 5. Start filtering and alignment. Bowtie and !TopHat is used to first filter and then align against a pre-defined set of transcripts.