Opened 5 years ago

Last modified 5 years ago

#463 new defect

Illumina expression background correction (version 1.7) does not ask for required permissions to write file

Reported by: johan Owned by: jari
Priority: major Milestone: Illumina package v1.8
Component: net.sf.basedb.illumina Keywords:
Cc:

Description

Illumina expression background correction (version 1.7)

When configured to Save background information (set to TRUE) the plugin return an error reporting that it fails to get permission to access the specified Experiment directory.

Looking at the code it seems as if the plugin ask for permission for experiment and job but does not ask for permissions required to read and write to directory for saving the background information file.

When configured not to Save background information (set to FALSE) the plugin runs as expected.

A workaround for fixing this bug is for an admin to configure the plugin definition (via BASE interface) so that the plugin get the needed permissions in this way.

Change History (2)

comment:1 Changed 5 years ago by nicklas

  • Component changed from not classified to net.sf.basedb.illumina
  • Milestone set to Illumina package v1.8
  • Owner changed from jari to nicklas

comment:2 Changed 5 years ago by nicklas

  • Owner changed from nicklas to jari
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