Opened 8 years ago

Closed 8 years ago

#408 closed enhancement (fixed)

Caliper importer should import NA values as -100

Reported by: Nicklas Nordborg Owned by: Nicklas Nordborg
Priority: major Milestone: Reggie v2.7
Component: net.sf.basedb.reggie Keywords:
Cc:

Description

We recently got an output file with "NA" in the RQS column. This results in an error message:

Line 15, column 'RNA Quality Score': NumberFormatException For input string: "NA"

After a short discussion it was decided that this should be imported as -100 instead.

Change History (1)

comment:1 Changed 8 years ago by Nicklas Nordborg

Resolution: fixed
Status: newclosed

(In [1707]) Fixes #408: Caliper importer should import NA values as -100

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