Changes between Initial Version and Version 1 of Ticket #228, comment 11


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Timestamp:
Dec 9, 2013, 3:56:36 PM (10 years ago)
Author:
olle

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  • Ticket #228, comment 11

    initial v1  
    1 Design update for `QuantileNormalizer`:
     1Design update for `QuantileNormalization`:
    22
    33 1. Data stored in logarithmic format should be untransformed before averaging, and then transformed back to logarithmic format before results are stored. The first part is already implemented by use of static method `VirtualColumn channelIntensity(int channel)` in class `AbstractNormalizationPlugin`, while public method `double transform(double value)` in class `IntensityTransform` should be used to transform the normalized result back before storing results.