#1125 closed task (fixed)

Unpause a paused specimen

Reported by: Nicklas Nordborg Owned by: Nicklas Nordborg
Priority: major Milestone: Reggie v4.22
Component: net.sf.basedb.reggie Keywords:
Cc:

Description

See #1124.

A new wizard is needed for selecting "paused" specimen that should be processed. It is similar to marking a specimen for re-extraction and it should be enough to simply set AutoProcessing to "ReProcess". This will make the paused specimen to appear in the "Re-extract" selection list in the partition wizard. The pick list protocol will most likely work with only minor modifications. The partition wizard need to be updated to allow partition options (Bloody, %Fat, etc.) to be set for the paused specimen. I think that only minor changes are required in existing code.

Change History (6)

comment:1 Changed 20 months ago by Nicklas Nordborg

In [5335]:

References #1125: Unpause a paused specimen

Updated the partition wizard so that it supports paused specimen. The assumption is that the AutoProcessing annotation is set to ReProcess when a paused specimen should be extracted.

  • The picklist has been updated to not assume that a specimen has a specific location and a paused specimen has an unknown remaining quantity.
  • The counter for number of specimen waiting for re-extraction no longer include a filter on storage box name (used to be 'Sp%').
  • In the partition form, most functionality already exists. Extracting a paused specimen is in some aspects similar to a regular re-extraction (box positions are changed) and in some aspects similar to a regular extraction (all partition fields about appearace, fat%, etc. should be active).

Most changes now rely on the 'original quantity' of a specimen being unknown the first time it is being partitioned.

comment:2 Changed 20 months ago by Nicklas Nordborg

In 5337:

References #1125: Unpause a paused specimen

Added a link on the index page to a new wizard for selecting paused specimen that should be extracted.

comment:3 Changed 20 months ago by Nicklas Nordborg

In 5341:

References #1125: Unpause a paused specimen

Added "Paused specimen" wizard. It can be used to schedule paused specimen for extraction. The specimen will remain in the wizard until they have been partitioned and it is possible to pause them again.

comment:4 Changed 20 months ago by Nicklas Nordborg

In 5343:

References #1125: Unpause a paused specimen

Fixed an issue with labels for histology items not being included as expected.

comment:5 Changed 20 months ago by Nicklas Nordborg

In 5346:

References #1125: Unpause a paused specimen

Fixes problems with ordering of specimen tubes in the re-extraction list. The tubes should be sorted in storage box order, but paused specimen should be sorted last.

In the partition form the paused specimen should be just after regular processing and before "real" re-processing.

comment:6 Changed 20 months ago by Nicklas Nordborg

Resolution: fixed
Status: newclosed
Note: See TracTickets for help on using tickets.