Changes between Version 2 and Version 15 of Ticket #1054


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Timestamp:
Sep 26, 2018, 9:19:12 AM (6 years ago)
Author:
Nicklas Nordborg
Comment:

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  • Ticket #1054 – Description

    v2 v15  
    11See #1050.
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    3  * Implement possibility to flag and add/modify comments when scheduling re-extractions. Since it takes about a week or more to get the result it is good to be able keep some information about why the re-extraction was made in the first place.
     3 * [Done] Implement possibility to flag and add/modify comments when scheduling re-extractions. Since it takes about a week or more to get the result it is good to be able keep some information about why the re-extraction was made in the first place.
    44
    5  * Introduce a `DoNotUse` flag that should be set on the top-most item that is considered incorrect. The top-most item is typically a Specimen, Lysate, RNA or Library. The flag should then be copied downstreams to all child items. A `DoNotUseComment` that goes along with the flag is probably also a good idea.
     5 * [Done] Introduce a `DoNotUse` flag that should be set on the top-most item that is considered incorrect. The top-most item is typically a Specimen, Lysate, RNA, PreNormalizedRNA or Library. The flag should then be copied downstreams to all child items. A `DoNotUseComment` that goes along with the flag is probably also a good idea.
    66
    7  * Alignments that are flagged as `DoNotUse` should be removed from the `Flagged alignments` list and disabled for future genotype checks. Remaining items in the list should be checked again and items that no longer get any genotype warning should also be removed.
     7 * [Done] Alignments that are flagged as `DoNotUse` should be removed from the `Flagged alignments` list and disabled for future genotype checks. '''(Update) Disabling is the default, but there should also be an option to keep them available for genotype checks.''' Remaining items in the list should be checked again and items that no longer get any genotype warning should also be removed.
    88
    99 * A lot of other wizards need to be updated to check the `DoNotUse` flag. For example: