#1027 closed defect (fixed)

External samples and Stratagene should not be part of genotyping qc

Reported by: Nicklas Nordborg Owned by: Nicklas Nordborg
Priority: major Milestone: Reggie v4.16
Component: net.sf.basedb.reggie Keywords:
Cc:

Description

The genotyping qc rely on being able to identify samples belonging to the same patient. We do not have this information for external samples (or Stratagene). This causes the genotype qc wizard to fail with a NullPointerException. The solution is to not include the samples in the qc wizard which can be accomplished by setting QC_GenoTypeStatus=Disabled. Reggie should be updated to do this automatically. In the meantime, this has to be done manually.

Change History (2)

comment:1 Changed 13 months ago by Nicklas Nordborg

Status: newassigned

comment:2 Changed 13 months ago by Nicklas Nordborg

Resolution: fixed
Status: assignedclosed

(In [4688]) Fixes #1027: External samples and Stratagene should not be part of genotyping qc

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