#1024 closed task (fixed)

Create annotation type definitions for INCA 2.0

Reported by: Nicklas Nordborg Owned by: Nicklas Nordborg
Priority: major Milestone: Reggie v4.16
Component: net.sf.basedb.reggie Keywords:
Cc:

Description

INCA has been updated to version 2.0. Most variables have been renamed. We need to create a new annotation type definitions file for creating (or updating) annotation types. The file that was used to define the current INCA annotation type can be found in /home/SCANB/BatchUpdateFiles/annotationtype.export_20160616_0945_inca_annotation_columns_-_updated.csv

The INCA_ prefix should be replaced with INCA2_.

See also #1022 and #1023.

Change History (6)

comment:1 Changed 12 months ago by Nicklas Nordborg

Status: newassigned

comment:2 Changed 12 months ago by Nicklas Nordborg

(In [4699]) References #1024: Create annotation type definitions for INCA 2.0

Defined 'INCA2_a_diag_dat' annotation and added it to the installation wizard.

comment:3 Changed 12 months ago by Nicklas Nordborg

(In [4705]) References #1024: Create annotation type definitions for INCA 2.0

Removed remaining instances of the INCA_A030DiaDat annotation from the code.

comment:4 Changed 12 months ago by Nicklas Nordborg

A file with all INCA 2 annotation type definitions has been uploaded to /home/SCANB/BatchUpdateFiles/inca2_definitions_all.txt on the production server. Use this file with the Annotation type batch importer to create the new annotation types.

comment:5 Changed 12 months ago by Nicklas Nordborg

See Reggie 4.16 update notes for notes about getting rid of old INCA data and importing new.

Last edited 12 months ago by Nicklas Nordborg (previous) (diff)

comment:6 Changed 12 months ago by Nicklas Nordborg

Resolution: fixed
Status: assignedclosed
Note: See TracTickets for help on using tickets.