Ticket #422: cdna-wizards-1.txt

File cdna-wizards-1.txt, 1.2 KB (added by Nicklas Nordborg, 8 years ago)

Overview of items and information to be registered

Line 
1
2Overview
3========
4 * RNA -> mRNA (fragmented) -> cDNA
5
6 
7Fragmented mRNA
8===============
9 * name: <scanb-id>.1.l.r.m
10 * item subtype: mRNA
11 * description: <comment>
12 * original quantity: do not track
13 
14 * Creation event:
15   - date: <>
16   - protocol: ProtocolType=mRNA preparation
17 
18 * Parent item:
19   - single RNA item as parent
20   - used quantity: 1.1µg or 1.22µg (for QC)
21   
22 * Bioplate:
23   - name: mRNA<001>
24   - bioplate type: mRNA reaction plate
25   - geometry: 8x12
26   - description: <comment>
27   - files: result files from QC measurements - TODO: define file types
28   
29 * Annotations
30   - operator: String
31   - qc values: (imported from files)
32   
33   
34cDNA
35====
36 * name: <scanb-id>.1.l.r.m.c
37 * item subtype: cDNA
38 * description: <comment>
39 * original quantity: do not track
40 
41 * Creation event:
42   - date: <>
43   - protocol: ProtocolType=cDNA preparation
44   
45 * Parent item
46   - single fragmented mRNA item
47   - used quantity: all (do not track)
48   
49 * Bioplate:
50   - name: cDNA<001>
51   - bioplate type: cDNA reaction plate
52   - geometry: 8x12
53   - description: <comment>
54   - files: no
55   
56  * Annotations
57    - operator: String
58
59